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Carbon-A open gene-finding model and 566M-candidate database released for 22,617 species

2 articles2 sourcessince Oct 8Last article

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Thomas Wolf says his team has released Carbon-A, an open model that finds genes directly in DNA, along with a database of 566.34 million candidate genes across 22,617 species, ranging from fungi to mammals.

Carbon-A does not design DNA or predict what a gene does, according to the release. The team reports wet-lab validation of several new genes in cats, chickens and Arabidopsis, and RNA evidence for 239 genes missing from reference annotations of common species. Leandro von Werra, in a separate report, describes the database as about 16 times the gene annotations in the RefSeq dataset; these are candidates, not confirmed genes.

Written by AI from the articles below · updated Oct 9, 9:50 AM ET

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Oct 8
  1. Leandro von WerraPick
    Carbon-A open model and database predict 566 million gene candidates across 22,617 species

    AICarbon-A is an open model that predicts gene locations directly from DNA, and it has been used to annotate genomes from over 22,000 species. The release includes a database of 566 million gene candidates, about 16 times the gene annotations in the RefSeq dataset. Wet-lab RNA experiments supported 239 candidates missing from RefSeq across cats, Syrian hamsters, chickens, and Arabidopsis.

  2. Thomas WolfPick
    Carbon-A open model and database find 566 million candidate genes across 22,617 species

    AIThomas Wolf says Carbon-A, an open model that finds genes directly in DNA, has been released with a database of 566.34 million candidate genes across 22,617 species. The team reports wet-lab validation of several new genes in cats, chickens and arabidopsis, and RNA evidence for 239 genes missing from reference annotations of common species.

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